{
  "_id": "6a1406e5acfb0bcc41d39814",
  "Package": "FMradio",
  "Type": "Package",
  "Title": "Factor Modeling for Radiomics Data",
  "Version": "1.1.2",
  "Maintainer": "Carel F.W. Peeters <carel.peeters@wur.nl>",
  "Authors@R": "c(person(given = c(\"Carel\", \"F.W.\"),\nfamily = \"Peeters\",\nrole = c(\"cre\", \"aut\"),\nemail = \"carel.peeters@wur.nl\"),\nperson(given = \"Caroline\",\nfamily = \"Ubelhor\",\nrole = \"ctb\"),\nperson(given = \"Kevin\",\nfamily = \"Kunzmann\",\nrole = \"ctb\"))",
  "Description": "Functions that support stable prediction and\nclassification with radiomics data through factor-analytic\nmodeling. For details, see Peeters et al. (2019)\n<doi:10.48550/arXiv.1903.11696>.",
  "biocViews": "",
  "ByteCompile": "true",
  "KeepSource": "yes",
  "License": "GPL (>= 2)",
  "BuildManual": "yes",
  "URL": "https://github.com/CFWP/FMradio",
  "Repository": "https://cfwp.r-universe.dev",
  "Date/Publication": "2025-08-28 13:47:21 UTC",
  "RemoteUrl": "https://github.com/cfwp/fmradio",
  "RemoteRef": "HEAD",
  "RemoteSha": "d550397e10da74d487c890d97acecdcd943b5564",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-25 08:19:43 UTC",
    "User": "root"
  },
  "Author": "Carel F.W. Peeters [cre, aut],\nCaroline Ubelhor [ctb],\nKevin Kunzmann [ctb]",
  "MD5sum": "c6dc41c55c4103dc00995ff1748754d8",
  "_user": "cfwp",
  "_type": "src",
  "_file": "FMradio_1.1.2.tar.gz",
  "_fileid": "8945c59d64ea00dba2bd5c5b8f6483057e780ecc8f31601131eb797d1867b84e",
  "_filesize": 324392,
  "_sha256": "8945c59d64ea00dba2bd5c5b8f6483057e780ecc8f31601131eb797d1867b84e",
  "_created": "2026-05-25T08:19:43.000Z",
  "_published": "2026-05-25T08:23:01.717Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77679974138,
      "time": 155,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7194496731"
    },
    {
      "job": 77679974140,
      "time": 157,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7194497176"
    },
    {
      "job": 77679974119,
      "time": 158,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7194492692"
    },
    {
      "job": 77679974110,
      "time": 132,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7194486802"
    },
    {
      "job": 77679580541,
      "time": 193,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7194458570"
    },
    {
      "job": 77679974104,
      "time": 95,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7194481989"
    },
    {
      "job": 77679974155,
      "time": 115,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7194487078"
    },
    {
      "job": 77679974113,
      "time": 114,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7194486454"
    },
    {
      "job": 77679974103,
      "time": 98,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7194482781"
    }
  ],
  "_buildurl": "https://github.com/r-universe/cfwp/actions/runs/26390720692",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cfwp/fmradio",
  "_commit": {
    "id": "d550397e10da74d487c890d97acecdcd943b5564",
    "author": "CFWP <carel.peeters@wur.nl>",
    "committer": "CFWP <carel.peeters@wur.nl>",
    "message": "fixed class\n",
    "time": 1756388841
  },
  "_maintainer": {
    "name": "Carel F.W. Peeters",
    "email": "carel.peeters@wur.nl",
    "login": "cfwp",
    "description": "Statistician specializing in multivariate and high-dimensional statistical learning",
    "uuid": 11041209
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 2.15.1",
      "role": "Depends"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "reshape",
      "role": "Imports"
    },
    {
      "package": "Biobase",
      "role": "Imports"
    },
    {
      "package": "graphics",
      "role": "Imports"
    },
    {
      "package": "expm",
      "role": "Imports"
    },
    {
      "package": "MASS",
      "role": "Imports"
    }
  ],
  "_owner": "cfwp",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-35",
      "n": 5
    }
  ],
  "_tags": [
    {
      "name": "v1.1.2",
      "date": "2025-08-28"
    }
  ],
  "_topics": [
    "factor-analysis",
    "machine-learning",
    "radiomics"
  ],
  "_stars": 12,
  "_contributors": [
    {
      "user": "cfwp",
      "count": 51,
      "uuid": 11041209
    }
  ],
  "_userbio": {
    "uuid": 11041209,
    "type": "user",
    "name": "Carel F.W. Peeters",
    "description": "Statistician specializing in multivariate and high-dimensional statistical learning"
  },
  "_downloads": {
    "count": 530,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/FMradio"
  },
  "_devurl": "https://github.com/cfwp/fmradio",
  "_searchresults": 2,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/FMradio.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/cfwp/fmradio",
  "_realowner": "cfwp",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.1",
      "date": "2019-05-03"
    },
    {
      "version": "1.1.1",
      "date": "2019-12-16"
    },
    {
      "version": "1.1.2",
      "date": "2025-08-29"
    }
  ],
  "_exports": [
    "autoFMradio",
    "dimGB",
    "dimIC",
    "dimLRT",
    "dimVAR",
    "facScore",
    "facSMC",
    "FAsim",
    "mlFA",
    "radioHeat",
    "regcor",
    "RF",
    "SA",
    "SMC",
    "subSet"
  ],
  "_help": [
    {
      "page": "FMradio-package",
      "title": "Factor modeling for radiomic data",
      "topics": [
        "FMradio-package",
        "FMradio"
      ]
    },
    {
      "page": "autoFMradio",
      "title": "Wrapper for automated workflow",
      "topics": [
        "autoFMradio"
      ]
    },
    {
      "page": "dimGB",
      "title": "Assess the latent dimensionality using Guttman bounds",
      "concept": [
        "Guttman bounds"
      ],
      "topics": [
        "dimGB"
      ]
    },
    {
      "page": "dimIC",
      "title": "Assess the latent dimensionality using information criteria",
      "concept": [
        "Information criteria"
      ],
      "topics": [
        "dimIC"
      ]
    },
    {
      "page": "dimLRT",
      "title": "Assess the latent dimensionality using a likelihood ratio test",
      "concept": [
        "Factor analytic likelihood ratio testing"
      ],
      "topics": [
        "dimLRT"
      ]
    },
    {
      "page": "dimVAR",
      "title": "Assessing variances under factor solutions",
      "concept": [
        "Cumulative variance"
      ],
      "topics": [
        "dimVAR"
      ]
    },
    {
      "page": "facScore",
      "title": "Compute factor scores",
      "concept": [
        "Factor scores"
      ],
      "topics": [
        "facScore"
      ]
    },
    {
      "page": "facSMC",
      "title": "Evaluate the determinacy of factor scores",
      "concept": [
        "Factor determinacy"
      ],
      "topics": [
        "facSMC"
      ]
    },
    {
      "page": "FAsim",
      "title": "Simulate data according to the common factor analytic model",
      "concept": [
        "Data simulation"
      ],
      "topics": [
        "FAsim"
      ]
    },
    {
      "page": "mlFA",
      "title": "Maximum likelihood factor analysis",
      "concept": [
        "Factor analysis"
      ],
      "topics": [
        "mlFA"
      ]
    },
    {
      "page": "radioHeat",
      "title": "Visualize a (correlation) matrix as a heatmap",
      "concept": [
        "radiomic-feature heatmap"
      ],
      "topics": [
        "radioHeat"
      ]
    },
    {
      "page": "regcor",
      "title": "Regularized correlation matrix estimation",
      "concept": [
        "regularized correlation"
      ],
      "topics": [
        "regcor"
      ]
    },
    {
      "page": "RF",
      "title": "Redundancy filtering of a square (correlation) matrix",
      "concept": [
        "redundancy-filtering"
      ],
      "topics": [
        "RF"
      ]
    },
    {
      "page": "SA",
      "title": "Calculate the KMO measure of feature-sampling adequacy",
      "concept": [
        "KMO-index"
      ],
      "topics": [
        "SA"
      ]
    },
    {
      "page": "SMC",
      "title": "Compare squared multiple correlations with model-based communalities",
      "concept": [
        "Squared multiple correlation"
      ],
      "topics": [
        "SMC"
      ]
    },
    {
      "page": "subSet",
      "title": "Subset a data matrix or expression set",
      "concept": [
        "data subsetting"
      ],
      "topics": [
        "subSet"
      ]
    }
  ],
  "_readme": "https://github.com/cfwp/fmradio/raw/HEAD/README.md",
  "_rundeps": [
    "Biobase",
    "BiocGenerics",
    "cli",
    "cpp11",
    "expm",
    "farver",
    "generics",
    "ggplot2",
    "glue",
    "gtable",
    "isoband",
    "labeling",
    "lattice",
    "lifecycle",
    "MASS",
    "Matrix",
    "plyr",
    "R6",
    "RColorBrewer",
    "Rcpp",
    "reshape",
    "rlang",
    "S7",
    "scales",
    "vctrs",
    "viridisLite",
    "withr"
  ],
  "_score": 3.778151250383644,
  "_indexed": true,
  "_nocasepkg": "fmradio",
  "_universes": [
    "cfwp"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.1.2",
      "date": "2026-05-25T08:21:56.000Z",
      "distro": "noble",
      "commit": "d550397e10da74d487c890d97acecdcd943b5564",
      "fileid": "2b74f3d9f19f381dff663a4da0c651671ceb9b8a0bdd582ef2b735082f925433",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cfwp/actions/runs/26390720692"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.1.2",
      "date": "2026-05-25T08:22:00.000Z",
      "distro": "noble",
      "commit": "d550397e10da74d487c890d97acecdcd943b5564",
      "fileid": "ec8657a2df21f68455db2d9515358d0208c7e398bdae18945b0acdef7b62387d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cfwp/actions/runs/26390720692"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.1.2",
      "date": "2026-05-25T08:21:58.000Z",
      "commit": "d550397e10da74d487c890d97acecdcd943b5564",
      "fileid": "0594990c591a15a238ed509908eb8e70ee9c82c68771e94abd6f308a4e695d0d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cfwp/actions/runs/26390720692"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.1.2",
      "date": "2026-05-25T08:21:35.000Z",
      "commit": "d550397e10da74d487c890d97acecdcd943b5564",
      "fileid": "dc35012be2267046ddf1c2b8703c346e6966f3969229619389b55ee371c89046",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cfwp/actions/runs/26390720692"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.1.2",
      "date": "2026-05-25T08:21:41.000Z",
      "commit": "d550397e10da74d487c890d97acecdcd943b5564",
      "fileid": "0044613fb2e44584d7371ae522c7ecc0323243d6325a6d42b2a9730cb4c67f06",
      "status": "success",
      "buildurl": "https://github.com/r-universe/cfwp/actions/runs/26390720692"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.1.2",
      "date": "2026-05-25T08:21:13.000Z",
      "commit": "d550397e10da74d487c890d97acecdcd943b5564",
      "fileid": "5b40a4d3cb29d7ebdabd09aee0286fb74989bde70e92a45155a5e111dadc76c6",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cfwp/actions/runs/26390720692"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.1.2",
      "date": "2026-05-25T08:21:07.000Z",
      "commit": "d550397e10da74d487c890d97acecdcd943b5564",
      "fileid": "6b517f7e57e8d5d00872bf192a8ceac766f53f4615de923c6c400aa8ca4ddc8a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cfwp/actions/runs/26390720692"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.1.2",
      "date": "2026-05-25T08:20:59.000Z",
      "commit": "d550397e10da74d487c890d97acecdcd943b5564",
      "fileid": "26dd322d5feb2ae03f72f01cb39fc67ce25544cbc5b0d2fbb091ef84cc3a9240",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cfwp/actions/runs/26390720692"
    }
  ]
}